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Case study

Studying the Spatio-temporal Root Cell Development of Arabidopsis Using Single-Cell RNA-Seq

Exploring Root Cell Development in Arabidopsis through Advanced Single-Cell RNA-Seq

  • Pioneering Methodology: Strand NGS and PCA clustering with t-SNE provided deep insights into root cell differentiation.
  • Comprehensive Data Analysis: Analyzed 4,727 root cells, pinpointing 15 key clusters that elucidate complex gene expression patterns.
  • Innovative Pseudo-time Analysis: Advanced R-scripts map cell development through stages, illustrated in dynamic visualizations.
  • Significant Findings: Identified essential genes influencing root cell development, with pivotal insights into cortex and xylem differentiation.
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